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| computing:batch:jobscriptexample [2016/09/16 01:26] – [Example 2] iwn | computing:batch:jobscriptexample [2017/06/07 20:59] (current) – iwn | ||
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| + | Two examples of submission scripts to PSI's T3 batch system. | ||
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| ===== Example 1 ===== | ===== Example 1 ===== | ||
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| <file text submitExample2.sh> | <file text submitExample2.sh> | ||
| - | #!/bin/bash | + | #! /bin/bash |
| # https:// | # https:// | ||
| # run with qsub -q all.q submitAnalysis.sh | # run with qsub -q all.q submitAnalysis.sh | ||
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| SEUSERSUBDIR=" | SEUSERSUBDIR=" | ||
| SEOUTFILES=" | SEOUTFILES=" | ||
| - | HN_NAME=`whoami` | + | USER_SE_HOME=" |
| - | USER_SRM_HOME=" | + | SERESULTDIR=$USER_SE_HOME/ |
| - | SERESULTDIR=$USER_SRM_HOME/ | + | |