A) POS setup 
https://www.evernote.com/shard/s506/sh/b159ebc3-675e-4f57-89ed-995303f8d474/f31f1afbd43076ba

1) BPix standalone on pixeldev.

Log into vmepc-s2b18-07-01,
become pixeldev
goto pixeldev/RUN 
source setup.csh
run pixel supervisors, 2 options:
(a) open 5 windows, go to RUN, setup,csh, run each supervisor by 
./run_xdaq_pixelsuper.sh  
./run_xdaq_pixelfecsuper.sh  
./run_xdaq_pixeltkfecsuper.sh  
./run_xdaq_pixelfedsuper1.sh  
./run_xdaq_pixelfedsuper2.sh  

To kill POS you have to do CtrlC in each window.

(b) run everything from one script by
./run_supervisors.sh  (the messages on the console will be mixed-up)

TO kill POS do "killall xdaq.exe", it leaves the xdaq deamon running.

Log into vmepcs2b16-10
become pixeldev
goto pixeldev/RUN 
source setup.csh

run the ttc supervisor by 
./run_xdaq_pixelttcsuper.sh

kill POS by CtrlC.

2) Run POS from RCMS
Login to rcms as pixeldev
http://cmsrc-pixeldev.cms:37000/rcms/gui/servlet/RunGroupChooserServlet

note that this is different than the default (pixel pro)  address
http://cmsrc-pixel.cms:17000/rcms/gui/servlet/RunGroupChooserServlet

choose a configuration:
BPix.xml  - no dcs, no logReader, no PSX, no DB, local run numbers
BPix_split.xml - same but with global run numbers (do not use it)

3)  Control of POS, starting & stoping calibrations 

Now you should be able to access  all supervisors from firefox (must run on cmsusr).
PixelSupervisor   - vmepc-s2b18-07-01.cms:1970 

all other supervisors run on the same PC but with different ports:
FEDS - 1971, 1972, FEC - 1974, TKFEC - 1973
Initialize
select configuration/calibration, Configure
Run
 
Data (root files & new settings) are in
$DATA1/BPix/Run_0/Run_70

Logfiles are in the local directory RUN if you run without RCMS.
When running with RCMS log files (after DESTROY) are in
$LOG0/
 under the correct time-stamp.

4) Configurations in 
$CONFIG/BPix_0deg/

nametranslation: 4 (un-swapped), 3(swapped) 
detconfig: 58 (old), 59 (new), 60 (use)
fedcard: 6 - old, 10 - new, 11 -use
tbm: 4 - old, 5 - new, 6 - use
dac: 151- old, 152 - new, 153 - new updated, 154 - use
mask: 19 - old, 20 - new
trim: 24 - old, 25 - new
portcard: 12 - old, 13 - new, 14- use

use update scripts, e.g. ../../updateFed
to save new settings. Run them from the directory with the root files and new settings.

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B) Procedure 

https://www.evernote.com/shard/s506/sh/b159ebc3-675e-4f57-89ed-995303f8d474/f31f1afbd43076ba

1) Connect cooling tubes, power cables,  fibres.

2) Switch on cooling, observe flow and pressure.

For each shell, start e.g. with BpI

3) Select the right detconfig in the detconfig directory.

4) Power CCU (2.5V), observe current.

5) Power opto (2.5V)  sector by sector 1-8, observe currents.

6) Run the test program to scan the rings. All devices should there.

7) Loop over sectors
Power LV (2.8 D, 1.99 A, power HV 150V).
Configure, observe currents.

8) Once all sector are up try baseline.

9) If ROCs not programmed run DELAY25.

if OK move to another shell. 

After all 4 shells are OK we continue with the whole bpix.
We should now check the the fibbers are clean.
We can do it either using Address level calibration or 
Lea's software. We will decide on the fly.

The sequence to reach AddressLevels will be the following:

1) Delay 25

2) Baseline 

3) Clock

4) Baseline 

5) AohBias & AohGain

6) Baseline 

7) ROCUB

8) TBMUB

9) Baseline

10) Address levels (this is the first time we will use hits so CalDel and VcThr are an issue)
If this works, be happy, if not do

11) VcTheCalDelFIFO3 "toronado"
if it does not work try VcThrCalDelFIFO1
Than run again Address levels.

Now we can test the finer cleanness.
Final calibrations at the final temperature.